Query Matrix family_10_cluster_10
Consensus: GTCATTCN, Length: 8
Query Matrix family_10_cluster_10Consensus: GTCATTCN, Length: 8 | |
| Number of instances | Instance with highest total number of occurences | Instance with highest occurence in one sequence | Instance with highest z-score (Trawler) |
|---|---|---|---|
| 49 | GWCATK occurs 23 times in 8 sequences | 6 times for GTCAKK in iYPR036W | z-score= 13.569327 for GTCATKC |
| Name | Source DB | ID, Link to Source | Length | Orientation | Offset | Divergence | Overlap | Consensus |
|---|---|---|---|---|---|---|---|---|
| bzip_CREB | -- | - | 6 | reverse-complement | -2 | 0.209 | 4 | TGACGN |
| JASPAR | MA0089 | 6 | reverse-complement | 0 | 0.479 | 6 | NATGAC | |
| TAXCREB | TRANSFAC | M00115 | 15 | reverse-complement | -10 | 0.492 | 5 | ATGACGCATACCCCC |
| PPARA | TRANSFAC | M00242 | 20 | as given | -16 | 0.498 | 4 | CAAAACTAGGNCAAAGGTCA |
| JASPAR | MA0067 | 8 | as given | -1 | 0.512 | 7 | NGTCACGN | |
| TCF11 | TRANSFAC | M00285 | 13 | as given | 0 | 0.518 | 8 | GTCATNNWNNNNN |
| c-FOS | JASPAR | MA0099 | 8 | as given | -4 | 0.537 | 4 | GTGASTCA |
| VJUN | TRANSFAC | M00036 | 16 | as given | -8 | 0.577 | 8 | NYGATGACGTCATNCY |
| COUP-TF | JASPAR | MA0017 | 14 | reverse-complement | -10 | 0.590 | 4 | TGACCTTTGMMCYT |
| COUP | TRANSFAC | M00158 | 14 | reverse-complement | -10 | 0.590 | 4 | TGACCTTTGMMCYT |
| cEBP | JASPAR | MA0102 | 12 | as given | 4 | 0.595 | 4 | TTNYGCAATNNN |
| TCF11MAFG | TRANSFAC | M00284 | 22 | reverse-complement | -12 | 0.599 | 8 | NNNNNATGACTCAGCANTTNNG |
| ABF1 | TRANSFAC | M00015 | 22 | as given | -4 | 0.600 | 8 | NNANATCATTNTANACGNNNNN |
| BRN2 | TRANSFAC | M00145 | 16 | as given | 0 | 0.617 | 8 | NNCATNSNWAATNMRN |
| PAX2 | TRANSFAC | M00098 | 19 | as given | -4 | 0.634 | 8 | NNNNGTCANGNRTNANNNN |
| SKN1 | TRANSFAC | M00229 | 12 | as given | -4 | 0.648 | 8 | NNWTGTCATNMN |
| ABF | TRANSFAC | M00197 | 15 | as given | -1 | 0.674 | 8 | NATCACTNNNNACGW |
| CREB | TRANSFAC | M00039 | 8 | reverse-complement | -4 | 0.680 | 4 | TGACGTCA |
| OCT1 | TRANSFAC | M00162 | 14 | reverse-complement | -5 | 0.686 | 8 | CWNAWTKWSATRYN |
| CREBP1CJUN | TRANSFAC | M00041 | 8 | as given | -4 | 0.708 | 4 | TGACGTYA |
| CREBP1CJUN | TRANSFAC | M00041 | 8 | reverse-complement | -4 | 0.719 | 4 | TGACGTYA |
| VBP | TRANSFAC | M00228 | 10 | as given | -5 | 0.728 | 5 | GTTACGTAAT |
| HLF | TRANSFAC | M00260 | 10 | as given | -5 | 0.733 | 5 | GTTACGTAAT |
| CRP | TRANSFAC | M00202 | 26 | reverse-complement | -19 | 0.782 | 7 | NAATWAWTGTGANNNRNNTCACANTN |
| AP1 | TRANSFAC | M00188 | 11 | reverse-complement | -5 | 0.783 | 6 | RGTGACTMANN |
| MCM1 | TRANSFAC | M00125 | 16 | as given | -12 | 0.795 | 4 | NNTCCTAATNNGGTAA |
| OCT1 | TRANSFAC | M00162 | 14 | as given | -6 | 0.797 | 8 | CWNAWTKWSATRYN |
| PPARgamma-RXRal | JASPAR | MA0065 | 20 | as given | -13 | 0.803 | 7 | NNNGGGGTCAAAGGTCANNN |
| NFE2 | TRANSFAC | M00037 | 11 | as given | -6 | 0.804 | 5 | TGCTGAGTCAY |
| RORA1 | TRANSFAC | M00156 | 13 | as given | -8 | 0.815 | 5 | NNATNNAGGTCAN |
| PAX2 | TRANSFAC | M00098 | 19 | reverse-complement | -3 | 0.818 | 8 | NNNNGTCANGNRTNANNNN |
| CMYB | TRANSFAC | M00004 | 18 | reverse-complement | -9 | 0.829 | 8 | NCNRNNGRCNGTTGGKGG |
| XBP1 | TRANSFAC | M00251 | 17 | reverse-complement | -9 | 0.832 | 8 | NNGNTGACGTGKNNNAN |
| CREB | TRANSFAC | M00039 | 8 | as given | -4 | 0.839 | 4 | TGACGTCA |
| CF1 | TRANSFAC | M00111 | 9 | as given | -3 | 0.840 | 6 | GGGGTCAYS |
| ELF1 | TRANSFAC | M00110 | 16 | reverse-complement | 3 | 0.844 | 5 | NNNNNYGGTNTTGWAN |
| Bzip_Cebp | -- | - | 9 | as given | 3 | 0.845 | 5 | NTTNNNNNN |
| TST1 | TRANSFAC | M00133 | 15 | reverse-complement | 1 | 0.847 | 7 | NNKGAATTANANTNN |
| AP1 | TRANSFAC | M00199 | 9 | as given | -4 | 0.850 | 5 | NTGASTCAG |
| GCN4 | TRANSFAC | M00038 | 27 | reverse-complement | -13 | 0.854 | 8 | NSNSNNNNNRTGACTCATNSNNNNNNN |
| bHLH | -- | - | 8 | reverse-complement | 2 | 0.857 | 6 | NNCNNNTG |
| CEBP | TRANSFAC | M00201 | 18 | reverse-complement | -10 | 0.880 | 8 | NGNNTTNNGCAAKNNACN |
| MZF1 | TRANSFAC | M00084 | 13 | reverse-complement | 4 | 0.881 | 4 | KNNNGAGGGGNAA |
| MAD_box | -- | - | 10 | as given | 2 | 0.883 | 6 | CNNNNNNNNG |
| AP1FJ | TRANSFAC | M00172 | 11 | reverse-complement | -5 | 0.884 | 6 | RGTGACNNANN |
| HNF4 | TRANSFAC | M00134 | 19 | as given | -12 | 0.892 | 7 | NNNRGGNCAAAGKTCANNN |
| YY1 | TRANSFAC | M00059 | 17 | as given | -4 | 0.900 | 8 | NNNNNCCATNTWNNNNN |
Query Matrix family_10_cluster_16Consensus: TWGTCATN, Length: 8 |  |
| Number of instances | Instance with highest total number of occurences | Instance with highest occurence in one sequence | Instance with highest z-score (Trawler) |
|---|---|---|---|
| 11 | WGTCAT occurs 18 times in 7 sequences | 5 times for WGTCAT in iYPR036W | z-score= 7.120406 for KWGTCAT |
| Name | Source DB | ID, Link to Source | Length | Orientation | Offset | Divergence | Overlap | Consensus |
|---|---|---|---|---|---|---|---|---|
| SKN1 | TRANSFAC | M00229 | 12 | as given | -2 | 0.331 | 8 | NNWTGTCATNMN |
| O2 | TRANSFAC | M00010 | 16 | as given | 3 | 0.541 | 5 | TCATTCCACGTAGATA |
| TCF11 | TRANSFAC | M00285 | 13 | as given | 2 | 0.589 | 6 | GTCATNNWNNNNN |
| JASPAR | MA0089 | 6 | reverse-complement | 2 | 0.591 | 6 | NATGAC | |
| TCF11MAFG | TRANSFAC | M00284 | 22 | reverse-complement | -10 | 0.873 | 8 | NNNNNATGACTCAGCANTTNNG |
Query Matrix family_15_cluster_15Consensus: YCYGCGK, Length: 7 |  |
| Number of instances | Instance with highest total number of occurences | Instance with highest occurence in one sequence | Instance with highest z-score (Trawler) |
|---|---|---|---|
| 2 | CYGCGK occurs 17 times in 4 sequences | 8 times for CYGCGK in iYPR036W | z-score= 7.1931624 for CYGCGK |
No similar matrices found. (cutoff: 0.9)